Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 AL391256.1-201ENST00000443260 1855 ntBASIC14.29□□□□□ -0.12
SPTA1P02549 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
SPTA1P02549 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.29□□□□□ -0.12
SPTA1P02549 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.29□□□□□ -0.12
SPTA1P02549 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.29□□□□□ -0.12
SPTA1P02549 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SPTA1P02549 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SPTA1P02549 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 RPSAP36-202ENST00000494591 1261 ntBASIC14.29□□□□□ -0.12
SPTA1P02549 FTLP10-202ENST00000505798 471 ntBASIC14.29□□□□□ -0.12
SPTA1P02549 IQSEC3P1-201ENST00000538799 536 ntBASIC14.29□□□□□ -0.12
SPTA1P02549 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.29□□□□□ -0.12
SPTA1P02549 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.29□□□□□ -0.12
SPTA1P02549 MIR4741-201ENST00000579822 90 ntBASIC14.29□□□□□ -0.12
SPTA1P02549 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.29□□□□□ -0.12
SPTA1P02549 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.29□□□□□ -0.12
SPTA1P02549 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.29□□□□□ -0.12
SPTA1P02549 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.29□□□□□ -0.12
SPTA1P02549 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
SPTA1P02549 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.29□□□□□ -0.12
SPTA1P02549 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.29□□□□□ -0.12
SPTA1P02549 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 REXO1L1P-202ENST00000608646 1974 ntBASIC14.29□□□□□ -0.12
SPTA1P02549 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SPTA1P02549 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.29□□□□□ -0.12
SPTA1P02549 KRT18P43-201ENST00000469825 1281 ntBASIC14.29□□□□□ -0.12
SPTA1P02549 SERPINA13P-202ENST00000478994 924 ntBASIC14.29□□□□□ -0.12
SPTA1P02549 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.29□□□□□ -0.12
SPTA1P02549 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SPTA1P02549 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.29□□□□□ -0.12
SPTA1P02549 AC244452.3-201ENST00000636814 210 ntBASIC14.29□□□□□ -0.12
SPTA1P02549 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
SPTA1P02549 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.28□□□□□ -0.12
SPTA1P02549 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SPTA1P02549 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SPTA1P02549 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
SPTA1P02549 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTA1P02549 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTA1P02549 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTA1P02549 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.28□□□□□ -0.12
SPTA1P02549 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 HSPB1P2-201ENST00000448722 546 ntBASIC14.28□□□□□ -0.12
SPTA1P02549 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SPTA1P02549 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTA1P02549 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTA1P02549 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.28□□□□□ -0.12
SPTA1P02549 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.28□□□□□ -0.12
SPTA1P02549 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTA1P02549 AP003419.4-201ENST00000616071 517 ntBASIC14.28□□□□□ -0.12
SPTA1P02549 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.28□□□□□ -0.12
SPTA1P02549 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SPTA1P02549 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SPTA1P02549 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTA1P02549 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPTA1P02549 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SPTA1P02549 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SPTA1P02549 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
SPTA1P02549 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.27□□□□□ -0.12
SPTA1P02549 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC14.27□□□□□ -0.12
SPTA1P02549 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.27□□□□□ -0.12
SPTA1P02549 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SPTA1P02549 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SPTA1P02549 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTA1P02549 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPTA1P02549 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTA1P02549 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTA1P02549 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTA1P02549 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms