Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.95■□□□□ 0.62
COL4A1P02462 CALR4P-201ENST00000431943 946 ntBASIC18.95■□□□□ 0.62
COL4A1P02462 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.95■□□□□ 0.62
COL4A1P02462 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.95■□□□□ 0.62
COL4A1P02462 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A1P02462 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.95■□□□□ 0.62
COL4A1P02462 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.95■□□□□ 0.62
COL4A1P02462 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
COL4A1P02462 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A1P02462 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COL4A1P02462 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.95■□□□□ 0.62
COL4A1P02462 AC084018.2-201ENST00000613093 2607 ntBASIC18.95■□□□□ 0.62
COL4A1P02462 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A1P02462 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A1P02462 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COL4A1P02462 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
COL4A1P02462 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
COL4A1P02462 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.95■□□□□ 0.62
COL4A1P02462 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.95■□□□□ 0.62
COL4A1P02462 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COL4A1P02462 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL4A1P02462 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A1P02462 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
COL4A1P02462 AC104457.1-201ENST00000401024 814 ntBASIC18.95■□□□□ 0.62
COL4A1P02462 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.95■□□□□ 0.62
COL4A1P02462 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.95■□□□□ 0.62
COL4A1P02462 KRT8P13-201ENST00000463294 1010 ntBASIC18.95■□□□□ 0.62
COL4A1P02462 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.95■□□□□ 0.62
COL4A1P02462 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.95■□□□□ 0.62
COL4A1P02462 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
COL4A1P02462 AC105129.2-201ENST00000559536 390 ntBASIC18.95■□□□□ 0.62
COL4A1P02462 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A1P02462 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A1P02462 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A1P02462 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A1P02462 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.95■□□□□ 0.62
COL4A1P02462 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL4A1P02462 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL4A1P02462 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL4A1P02462 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COL4A1P02462 MST1L-201ENST00000442552 2185 ntBASIC18.94■□□□□ 0.62
COL4A1P02462 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
COL4A1P02462 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
COL4A1P02462 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COL4A1P02462 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
COL4A1P02462 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A1P02462 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL4A1P02462 AC091804.1-201ENST00000486888 567 ntBASIC18.94■□□□□ 0.62
COL4A1P02462 RNA5SP423-201ENST00000517127 109 ntBASIC18.94■□□□□ 0.62
COL4A1P02462 AL451050.2-201ENST00000606967 682 ntBASIC18.94■□□□□ 0.62
COL4A1P02462 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.94■□□□□ 0.62
COL4A1P02462 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A1P02462 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A1P02462 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A1P02462 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL4A1P02462 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.93■□□□□ 0.62
COL4A1P02462 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.93■□□□□ 0.62
COL4A1P02462 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
COL4A1P02462 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL4A1P02462 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COL4A1P02462 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.93■□□□□ 0.62
COL4A1P02462 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.93■□□□□ 0.62
COL4A1P02462 CHMP4BP1-201ENST00000556017 588 ntBASIC18.93■□□□□ 0.62
COL4A1P02462 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.93■□□□□ 0.62
COL4A1P02462 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 ENPP7P14-201ENST00000621765 1040 ntBASIC18.93■□□□□ 0.62
COL4A1P02462 AC132938.4-201ENST00000623835 848 ntBASIC18.93■□□□□ 0.62
COL4A1P02462 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.93■□□□□ 0.62
COL4A1P02462 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL4A1P02462 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COL4A1P02462 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A1P02462 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A1P02462 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A1P02462 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A1P02462 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms