Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DQA1P01909 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DQA1P01909 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DQA1P01909 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DQA1P01909 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 PEG13-201ENST00000631594 5667 ntBASIC11.98□□□□□ -0.49
HLA-DQA1P01909 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 MIR662-201ENST00000384847 95 ntBASIC11.98□□□□□ -0.49
HLA-DQA1P01909 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DQA1P01909 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 AL031595.1-201ENST00000623969 4709 ntBASIC11.97□□□□□ -0.49
HLA-DQA1P01909 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 FAM8A3P-201ENST00000427218 844 ntBASIC11.97□□□□□ -0.49
HLA-DQA1P01909 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DQA1P01909 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms