Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITM2AO43736 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITM2AO43736 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
ITM2AO43736 AL136982.4-201ENST00000437689 1740 ntBASIC15.56■□□□□ 0.08
ITM2AO43736 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITM2AO43736 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ITM2AO43736 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITM2AO43736 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.56■□□□□ 0.08
ITM2AO43736 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.56■□□□□ 0.08
ITM2AO43736 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ITM2AO43736 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITM2AO43736 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.56■□□□□ 0.08
ITM2AO43736 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITM2AO43736 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.56■□□□□ 0.08
ITM2AO43736 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.56■□□□□ 0.08
ITM2AO43736 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ITM2AO43736 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.56■□□□□ 0.08
ITM2AO43736 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ITM2AO43736 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
ITM2AO43736 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ITM2AO43736 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ITM2AO43736 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ITM2AO43736 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.55■□□□□ 0.08
ITM2AO43736 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.55■□□□□ 0.08
ITM2AO43736 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ITM2AO43736 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.55■□□□□ 0.08
ITM2AO43736 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.55■□□□□ 0.08
ITM2AO43736 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.55■□□□□ 0.08
ITM2AO43736 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 BCAR1-209ENST00000546196 1340 ntBASIC15.55■□□□□ 0.08
ITM2AO43736 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.55■□□□□ 0.08
ITM2AO43736 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.55■□□□□ 0.08
ITM2AO43736 AC018845.2-201ENST00000568326 409 ntBASIC15.55■□□□□ 0.08
ITM2AO43736 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
ITM2AO43736 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.55■□□□□ 0.08
ITM2AO43736 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ITM2AO43736 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ITM2AO43736 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.55■□□□□ 0.08
ITM2AO43736 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ITM2AO43736 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.55■□□□□ 0.08
ITM2AO43736 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ITM2AO43736 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.54■□□□□ 0.08
ITM2AO43736 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.54■□□□□ 0.08
ITM2AO43736 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.54■□□□□ 0.08
ITM2AO43736 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.54■□□□□ 0.08
ITM2AO43736 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.54■□□□□ 0.08
ITM2AO43736 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.54■□□□□ 0.08
ITM2AO43736 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.54■□□□□ 0.08
ITM2AO43736 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.54■□□□□ 0.08
ITM2AO43736 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ITM2AO43736 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.54■□□□□ 0.08
ITM2AO43736 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.54■□□□□ 0.08
ITM2AO43736 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.54■□□□□ 0.08
ITM2AO43736 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ITM2AO43736 AC026396.1-201ENST00000419388 421 ntBASIC15.54■□□□□ 0.08
ITM2AO43736 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.54■□□□□ 0.08
ITM2AO43736 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 AC098859.1-201ENST00000502915 1238 ntBASIC15.54■□□□□ 0.08
ITM2AO43736 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 IGHV3-22-201ENST00000520721 359 ntBASIC15.54■□□□□ 0.08
ITM2AO43736 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.54■□□□□ 0.08
ITM2AO43736 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.54■□□□□ 0.08
ITM2AO43736 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.54■□□□□ 0.08
ITM2AO43736 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.54■□□□□ 0.08
ITM2AO43736 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
ITM2AO43736 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ITM2AO43736 AC073389.1-201ENST00000595595 795 ntBASIC15.54■□□□□ 0.08
ITM2AO43736 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms