Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.1■□□□□ 0.81
KCNQ3O43525 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.1■□□□□ 0.81
KCNQ3O43525 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC20.1■□□□□ 0.81
KCNQ3O43525 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
KCNQ3O43525 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.1■□□□□ 0.81
KCNQ3O43525 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.1■□□□□ 0.81
KCNQ3O43525 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.1■□□□□ 0.81
KCNQ3O43525 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
KCNQ3O43525 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 AL118508.1-201ENST00000613502 2345 ntBASIC20.1■□□□□ 0.81
KCNQ3O43525 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
KCNQ3O43525 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.1■□□□□ 0.81
KCNQ3O43525 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC20.1■□□□□ 0.81
KCNQ3O43525 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNQ3O43525 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
KCNQ3O43525 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
KCNQ3O43525 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
KCNQ3O43525 AL138799.1-201ENST00000448213 1675 ntBASIC20.1■□□□□ 0.81
KCNQ3O43525 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC20.1■□□□□ 0.81
KCNQ3O43525 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.09■□□□□ 0.81
KCNQ3O43525 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
KCNQ3O43525 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
KCNQ3O43525 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.09■□□□□ 0.81
KCNQ3O43525 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
KCNQ3O43525 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.09■□□□□ 0.81
KCNQ3O43525 CYP2T1P-202ENST00000641596 2535 ntBASIC20.09■□□□□ 0.81
KCNQ3O43525 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KCNQ3O43525 AC009090.5-201ENST00000624886 2285 ntBASIC20.09■□□□□ 0.81
KCNQ3O43525 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
KCNQ3O43525 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.09■□□□□ 0.81
KCNQ3O43525 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
KCNQ3O43525 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.09■□□□□ 0.81
KCNQ3O43525 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.09■□□□□ 0.81
KCNQ3O43525 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.09■□□□□ 0.81
KCNQ3O43525 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC20.09■□□□□ 0.81
KCNQ3O43525 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
KCNQ3O43525 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KCNQ3O43525 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNQ3O43525 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.09■□□□□ 0.81
KCNQ3O43525 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KCNQ3O43525 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.09■□□□□ 0.81
KCNQ3O43525 AC090340.1-201ENST00000620778 4980 ntBASIC20.08■□□□□ 0.81
KCNQ3O43525 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.08■□□□□ 0.81
KCNQ3O43525 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KCNQ3O43525 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KCNQ3O43525 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.08■□□□□ 0.81
KCNQ3O43525 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNQ3O43525 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
KCNQ3O43525 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNQ3O43525 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNQ3O43525 ACKR1-201ENST00000368121 1240 ntBASIC20.08■□□□□ 0.81
KCNQ3O43525 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.08■□□□□ 0.81
KCNQ3O43525 AC016694.1-201ENST00000434179 700 ntBASIC20.08■□□□□ 0.81
KCNQ3O43525 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNQ3O43525 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.08■□□□□ 0.81
KCNQ3O43525 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.08■□□□□ 0.81
KCNQ3O43525 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC20.08■□□□□ 0.81
KCNQ3O43525 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KCNQ3O43525 KRT90P-201ENST00000549264 1064 ntBASIC20.08■□□□□ 0.81
KCNQ3O43525 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNQ3O43525 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.08■□□□□ 0.81
KCNQ3O43525 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.08■□□□□ 0.81
KCNQ3O43525 AC025181.2-201ENST00000606994 802 ntBASIC20.08■□□□□ 0.81
KCNQ3O43525 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
KCNQ3O43525 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
KCNQ3O43525 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KCNQ3O43525 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.08■□□□□ 0.8
KCNQ3O43525 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KCNQ3O43525 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
KCNQ3O43525 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
KCNQ3O43525 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms