Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.79□□□□□ -0.2
PHF1O43189 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.79□□□□□ -0.2
PHF1O43189 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
PHF1O43189 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
PHF1O43189 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PHF1O43189 ARSEP1-201ENST00000420443 635 ntBASIC13.79□□□□□ -0.2
PHF1O43189 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.79□□□□□ -0.2
PHF1O43189 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.79□□□□□ -0.2
PHF1O43189 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.79□□□□□ -0.2
PHF1O43189 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.79□□□□□ -0.2
PHF1O43189 MIR6799-201ENST00000620297 69 ntBASIC13.79□□□□□ -0.2
PHF1O43189 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.79□□□□□ -0.2
PHF1O43189 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.79□□□□□ -0.2
PHF1O43189 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PHF1O43189 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PHF1O43189 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PHF1O43189 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PHF1O43189 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PHF1O43189 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 PRAL-201ENST00000624952 3286 ntBASIC13.79□□□□□ -0.2
PHF1O43189 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
PHF1O43189 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PHF1O43189 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.78□□□□□ -0.2
PHF1O43189 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.78□□□□□ -0.2
PHF1O43189 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 PCDHA3-202ENST00000532566 4594 ntBASIC13.78□□□□□ -0.2
PHF1O43189 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
PHF1O43189 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 PIN1P1-201ENST00000412108 996 ntBASIC13.78□□□□□ -0.2
PHF1O43189 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
PHF1O43189 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.78□□□□□ -0.2
PHF1O43189 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 SPDYE22P-201ENST00000582158 798 ntBASIC13.78□□□□□ -0.2
PHF1O43189 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 AL158211.3-201ENST00000607385 239 ntBASIC13.78□□□□□ -0.2
PHF1O43189 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.78□□□□□ -0.2
PHF1O43189 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PHF1O43189 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.78□□□□□ -0.2
PHF1O43189 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 AC092850.2-201ENST00000623821 2697 ntBASIC13.78□□□□□ -0.2
PHF1O43189 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PHF1O43189 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PHF1O43189 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.78□□□□□ -0.2
PHF1O43189 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PHF1O43189 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.78□□□□□ -0.2
PHF1O43189 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.78□□□□□ -0.2
PHF1O43189 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PHF1O43189 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 433.7 ms