Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TMX2-CTNND1H3BSU7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.61■□□□□ 0.09
TMX2-CTNND1H3BSU7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMX2-CTNND1H3BSU7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TMX2-CTNND1H3BSU7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMX2-CTNND1H3BSU7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.61■□□□□ 0.09
TMX2-CTNND1H3BSU7 AL671710.1-201ENST00000610245 2349 ntBASIC15.61■□□□□ 0.09
TMX2-CTNND1H3BSU7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.61■□□□□ 0.09
TMX2-CTNND1H3BSU7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.61■□□□□ 0.09
TMX2-CTNND1H3BSU7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 SPDYE19P-201ENST00000338590 713 ntBASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC114501.2-201ENST00000439631 535 ntBASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC010336.2-201ENST00000564226 506 ntBASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC104794.3-201ENST00000566840 1248 ntBASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMX2-CTNND1H3BSU7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC010491.1-201ENST00000563101 2797 ntBASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 HLA-A-202ENST00000376806 1854 ntBASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 ARSEP1-201ENST00000420443 635 ntBASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 AL139010.1-201ENST00000454878 894 ntBASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 GIMAP3P-201ENST00000495150 836 ntBASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 MEIS3P1-201ENST00000495167 958 ntBASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC055876.2-201ENST00000531834 546 ntBASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 SNX33P1-201ENST00000592116 1762 ntBASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMX2-CTNND1H3BSU7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms