Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.16□□□□□ -0.62
LINC01546A6NGU7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 AC004987.2-201ENST00000395959 1148 ntBASIC11.16□□□□□ -0.62
LINC01546A6NGU7 MIR935-201ENST00000401179 91 ntBASIC11.16□□□□□ -0.62
LINC01546A6NGU7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 KRT18P34-201ENST00000488218 1270 ntBASIC11.16□□□□□ -0.62
LINC01546A6NGU7 RPS15P9-201ENST00000494093 319 ntBASIC11.16□□□□□ -0.62
LINC01546A6NGU7 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 AL450472.2-201ENST00000603663 1156 ntBASIC11.16□□□□□ -0.62
LINC01546A6NGU7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 DGCR9-201ENST00000609630 2415 ntBASIC11.16□□□□□ -0.62
LINC01546A6NGU7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 AC055811.4-201ENST00000624039 1754 ntBASIC11.16□□□□□ -0.62
LINC01546A6NGU7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 AC074051.2-201ENST00000565115 352 ntBASIC11.15□□□□□ -0.62
LINC01546A6NGU7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.15□□□□□ -0.62
LINC01546A6NGU7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 AL591684.3-201ENST00000605187 298 ntBASIC11.15□□□□□ -0.62
LINC01546A6NGU7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 AC018529.2-202ENST00000611482 3087 ntBASIC11.15□□□□□ -0.62
LINC01546A6NGU7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms