Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 AC005622.1-201ENST00000636801 1703 ntBASIC17.27■□□□□ 0.36
CCDC66A2RUB6 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 MIR4515-201ENST00000584082 81 ntBASIC17.27■□□□□ 0.36
CCDC66A2RUB6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 AC005593.1-201ENST00000624894 515 ntBASIC17.27■□□□□ 0.36
CCDC66A2RUB6 CICP23-201ENST00000605013 2741 ntBASIC17.27■□□□□ 0.36
CCDC66A2RUB6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CCDC66A2RUB6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 AC067750.1-201ENST00000608826 6545 ntBASIC17.27■□□□□ 0.35
CCDC66A2RUB6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC66A2RUB6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 AC117489.1-201ENST00000625169 3217 ntBASIC17.26■□□□□ 0.35
CCDC66A2RUB6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 OR7E47P-204ENST00000575924 449 ntBASIC17.26■□□□□ 0.35
CCDC66A2RUB6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 AL121894.2-201ENST00000602977 491 ntBASIC17.26■□□□□ 0.35
CCDC66A2RUB6 AC021097.1-201ENST00000607902 574 ntBASIC17.26■□□□□ 0.35
CCDC66A2RUB6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 AC069224.1-201ENST00000566372 1715 ntBASIC17.26■□□□□ 0.35
CCDC66A2RUB6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CCDC66A2RUB6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms