Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 GUSBP12-201ENST00000513727 720 ntBASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 AC092119.3-201ENST00000612618 583 ntBASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 ZBED1P1-201ENST00000502364 1930 ntBASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 AC011477.6-201ENST00000604980 1927 ntBASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 KRT18P1-202ENST00000452408 1331 ntBASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH1Q9Y2L9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 AP002414.4-201ENST00000589764 1148 ntBASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms