Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.45■□□□□ 0.22
AP4E1Q9UPM8 MIR6069-201ENST00000620069 79 ntBASIC16.45■□□□□ 0.22
AP4E1Q9UPM8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
AP4E1Q9UPM8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4E1Q9UPM8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.45■□□□□ 0.22
AP4E1Q9UPM8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4E1Q9UPM8 AC068418.2-201ENST00000577309 3703 ntBASIC16.45■□□□□ 0.22
AP4E1Q9UPM8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4E1Q9UPM8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
AP4E1Q9UPM8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP4E1Q9UPM8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 AL033527.5-202ENST00000641632 1098 ntBASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 AC009090.5-201ENST00000624886 2285 ntBASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 AC136621.1-201ENST00000624017 2304 ntBASIC16.44■□□□□ 0.22
AP4E1Q9UPM8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 TREML5P-201ENST00000421694 576 ntBASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 AC027369.6-201ENST00000525520 931 ntBASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 SSR4P1-203ENST00000599569 2260 ntBASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 AC090616.6-203ENST00000579186 1945 ntBASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.43■□□□□ 0.22
AP4E1Q9UPM8 AC127383.1-201ENST00000444697 1800 ntBASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms