Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 AC244093.1-201ENST00000610837 814 ntBASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2IRD1Q9UHL9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 AC006449.5-201ENST00000610658 2098 ntBASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 RPL13AP20-201ENST00000459725 609 ntBASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 RN7SL560P-201ENST00000577943 264 ntBASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 AP005019.2-201ENST00000615104 511 ntBASIC17.27■□□□□ 0.36
GTF2IRD1Q9UHL9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GTF2IRD1Q9UHL9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GTF2IRD1Q9UHL9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.27■□□□□ 0.35
GTF2IRD1Q9UHL9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GTF2IRD1Q9UHL9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GTF2IRD1Q9UHL9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
GTF2IRD1Q9UHL9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GTF2IRD1Q9UHL9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms