Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CDC42SE2Q9NRR3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.96□□□□□ -0.66
CDC42SE2Q9NRR3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 AC004870.1-201ENST00000315132 882 ntBASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 AL645939.2-201ENST00000427340 991 ntBASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 AGAP7P-201ENST00000582299 2062 ntBASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 AGAP14-201ENST00000624701 2060 ntBASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 AC097376.2-205ENST00000610159 5334 ntBASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 AL009178.2-201ENST00000597278 2719 ntBASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
CDC42SE2Q9NRR3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AL365209.1-201ENST00000624418 6473 ntBASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms