Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 AL645939.2-201ENST00000427340 991 ntBASIC17.72■□□□□ 0.43
CBX8Q9HC52 FAM197Y8-203ENST00000450145 560 ntBASIC17.72■□□□□ 0.43
CBX8Q9HC52 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.72■□□□□ 0.43
CBX8Q9HC52 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 AC061975.2-201ENST00000581722 295 ntBASIC17.72■□□□□ 0.43
CBX8Q9HC52 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 IFNL4P1-201ENST00000607083 540 ntBASIC17.72■□□□□ 0.43
CBX8Q9HC52 AC148477.8-201ENST00000624298 468 ntBASIC17.72■□□□□ 0.43
CBX8Q9HC52 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.72■□□□□ 0.43
CBX8Q9HC52 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX8Q9HC52 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 AC067930.6-201ENST00000623257 4947 ntBASIC17.71■□□□□ 0.43
CBX8Q9HC52 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.71■□□□□ 0.43
CBX8Q9HC52 RHOQP3-201ENST00000437982 621 ntBASIC17.71■□□□□ 0.43
CBX8Q9HC52 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX8Q9HC52 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX8Q9HC52 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CBX8Q9HC52 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CBX8Q9HC52 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CBX8Q9HC52 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.71■□□□□ 0.42
CBX8Q9HC52 CICP14-201ENST00000629111 2732 ntBASIC17.71■□□□□ 0.42
CBX8Q9HC52 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX8Q9HC52 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms