Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 SOCS2P1-201ENST00000417727 557 ntBASIC18.41■□□□□ 0.54
SH2D4AQ9H788 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.41■□□□□ 0.54
SH2D4AQ9H788 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 AL607033.1-201ENST00000623900 1599 ntBASIC18.41■□□□□ 0.54
SH2D4AQ9H788 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 LINC02199-201ENST00000506655 2702 ntBASIC18.41■□□□□ 0.54
SH2D4AQ9H788 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 AL391005.1-201ENST00000623953 2435 ntBASIC18.4■□□□□ 0.54
SH2D4AQ9H788 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 MIR1909-201ENST00000411312 80 ntBASIC18.4■□□□□ 0.54
SH2D4AQ9H788 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 AL049840.4-201ENST00000602422 811 ntBASIC18.4■□□□□ 0.54
SH2D4AQ9H788 AC000095.1-201ENST00000603208 874 ntBASIC18.4■□□□□ 0.54
SH2D4AQ9H788 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH2D4AQ9H788 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.39■□□□□ 0.54
SH2D4AQ9H788 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.39■□□□□ 0.54
SH2D4AQ9H788 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SH2D4AQ9H788 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SH2D4AQ9H788 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.54
SH2D4AQ9H788 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SH2D4AQ9H788 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 CYP2T1P-202ENST00000641596 2535 ntBASIC18.39■□□□□ 0.53
SH2D4AQ9H788 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 MIR658-201ENST00000385210 100 ntBASIC18.39■□□□□ 0.53
SH2D4AQ9H788 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 ACTG1P3-201ENST00000431775 1114 ntBASIC18.39■□□□□ 0.53
SH2D4AQ9H788 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 AL359711.2-201ENST00000563105 872 ntBASIC18.39■□□□□ 0.53
SH2D4AQ9H788 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 BTNL10-201ENST00000595971 695 ntBASIC18.39■□□□□ 0.53
SH2D4AQ9H788 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 AL512343.1-201ENST00000605837 169 ntBASIC18.39■□□□□ 0.53
SH2D4AQ9H788 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms