Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 C18orf15-201ENST00000623680 2534 ntBASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 AC097493.3-201ENST00000509725 367 ntBASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 AC087499.5-201ENST00000452760 1342 ntBASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 KRT8P44-201ENST00000441609 1350 ntBASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 RPL13P2-201ENST00000440687 659 ntBASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 FAM86GP-201ENST00000448322 971 ntBASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 RN7SL618P-201ENST00000477850 296 ntBASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 SLED1-202ENST00000512051 380 ntBASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 AC027369.6-201ENST00000525520 931 ntBASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 ZNF890P-202ENST00000530367 1156 ntBASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 AC027796.2-201ENST00000575326 344 ntBASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 AC023157.3-201ENST00000619086 2088 ntBASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 AC138035.3-201ENST00000622706 2791 ntBASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCSER1Q9C0I3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 AL844908.2-201ENST00000609461 460 ntBASIC17.67■□□□□ 0.42
CCSER1Q9C0I3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms