Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 HMGN1P19-201ENST00000436976 333 ntBASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 AC009090.5-201ENST00000624886 2285 ntBASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AMBRA1Q9C0C7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 PMS2P2-201ENST00000425039 1128 ntBASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 AC140658.5-201ENST00000438532 169 ntBASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 AC005912.2-201ENST00000619492 2400 ntBASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 NORAD-201ENST00000565493 5339 ntBASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AMBRA1Q9C0C7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms