Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FAM58DP-201ENST00000428076 619 ntBASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 SNHG9-202ENST00000564014 471 ntBASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 RARRES2P9-201ENST00000565168 469 ntBASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 AC112693.3-201ENST00000624819 1983 ntBASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPF3BQ9BZI7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 C18orf15-201ENST00000623680 2534 ntBASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 AC093520.2-201ENST00000561830 333 ntBASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 MIR4469-201ENST00000583919 79 ntBASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 AL596442.2-201ENST00000610240 980 ntBASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF3BQ9BZI7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 KRT8P37-201ENST00000451609 1420 ntBASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 AL139010.1-201ENST00000454878 894 ntBASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 AC005829.1-201ENST00000570002 483 ntBASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms