Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFAF3Q9BU61 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 SIGLEC30P-201ENST00000455569 941 ntBASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 AC148477.8-201ENST00000624298 468 ntBASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 AF228730.7-201ENST00000641842 219 ntBASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFAF3Q9BU61 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 AL020989.1-201ENST00000422979 469 ntBASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 KRT18P58-201ENST00000527480 1120 ntBASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 SART3-203ENST00000546611 1184 ntBASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 AC021087.4-201ENST00000563761 564 ntBASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 AC073592.5-201ENST00000624854 528 ntBASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 FAM215A-202ENST00000632077 792 ntBASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms