Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HDHD3Q9BSH5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 SLC25A6P4-201ENST00000586535 553 ntBASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 AC068137.2-201ENST00000605408 478 ntBASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 REXO1L1P-202ENST00000608646 1974 ntBASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 AC127383.1-201ENST00000444697 1800 ntBASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 SNX18-202ENST00000343017 3140 ntBASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 FOXO1B-201ENST00000504678 1527 ntBASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HDHD3Q9BSH5 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 AL691432.1-201ENST00000596308 1422 ntBASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 AL450487.1-201ENST00000426799 995 ntBASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 AC009078.2-202ENST00000463353 338 ntBASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 AC034105.1-201ENST00000563488 319 ntBASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 AL161645.1-201ENST00000622716 1255 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms