Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.49■□□□□ 0.87
ABCA3Q99758 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
ABCA3Q99758 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ABCA3Q99758 AL157791.1-201ENST00000553667 1699 ntBASIC20.49■□□□□ 0.87
ABCA3Q99758 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 AL133373.2-201ENST00000623187 2828 ntBASIC20.49■□□□□ 0.87
ABCA3Q99758 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ABCA3Q99758 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20.49■□□□□ 0.87
ABCA3Q99758 VDAC1P1-201ENST00000439229 848 ntBASIC20.49■□□□□ 0.87
ABCA3Q99758 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.49■□□□□ 0.87
ABCA3Q99758 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
ABCA3Q99758 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.49■□□□□ 0.87
ABCA3Q99758 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.49■□□□□ 0.87
ABCA3Q99758 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
ABCA3Q99758 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 CAP2P1-201ENST00000557743 1390 ntBASIC20.49■□□□□ 0.87
ABCA3Q99758 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.49■□□□□ 0.87
ABCA3Q99758 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCA3Q99758 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC20.49■□□□□ 0.87
ABCA3Q99758 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.48■□□□□ 0.87
ABCA3Q99758 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
ABCA3Q99758 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ABCA3Q99758 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCA3Q99758 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCA3Q99758 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ABCA3Q99758 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ABCA3Q99758 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.48■□□□□ 0.87
ABCA3Q99758 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
ABCA3Q99758 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC20.48■□□□□ 0.87
ABCA3Q99758 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC20.48■□□□□ 0.87
ABCA3Q99758 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ABCA3Q99758 AC021723.1-201ENST00000486306 515 ntBASIC20.48■□□□□ 0.87
ABCA3Q99758 MESTP3-201ENST00000503460 968 ntBASIC20.48■□□□□ 0.87
ABCA3Q99758 AC084364.1-201ENST00000551967 1556 ntBASIC20.48■□□□□ 0.87
ABCA3Q99758 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCA3Q99758 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCA3Q99758 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ABCA3Q99758 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.48■□□□□ 0.87
ABCA3Q99758 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCA3Q99758 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCA3Q99758 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCA3Q99758 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
ABCA3Q99758 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 AC026316.1-201ENST00000398900 414 ntBASIC20.47■□□□□ 0.87
ABCA3Q99758 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 AC006335.1-201ENST00000445200 547 ntBASIC20.47■□□□□ 0.87
ABCA3Q99758 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC20.47■□□□□ 0.87
ABCA3Q99758 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC20.47■□□□□ 0.87
ABCA3Q99758 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 MIR3677-201ENST00000578964 60 ntBASIC20.47■□□□□ 0.87
ABCA3Q99758 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
ABCA3Q99758 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC20.47■□□□□ 0.87
ABCA3Q99758 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
ABCA3Q99758 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 MTHFR-217ENST00000641820 1569 ntBASIC20.47■□□□□ 0.87
ABCA3Q99758 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ABCA3Q99758 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 AC124067.4-201ENST00000519691 2379 ntBASIC20.47■□□□□ 0.87
ABCA3Q99758 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
ABCA3Q99758 AC078991.1-201ENST00000437297 610 ntBASIC20.47■□□□□ 0.87
ABCA3Q99758 RN7SL67P-201ENST00000492147 296 ntBASIC20.47■□□□□ 0.87
ABCA3Q99758 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC20.47■□□□□ 0.87
ABCA3Q99758 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC20.47■□□□□ 0.87
ABCA3Q99758 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 AL132994.2-201ENST00000603120 687 ntBASIC20.47■□□□□ 0.87
ABCA3Q99758 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
ABCA3Q99758 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.47■□□□□ 0.87
ABCA3Q99758 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ABCA3Q99758 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.46■□□□□ 0.87
ABCA3Q99758 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ABCA3Q99758 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ABCA3Q99758 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ABCA3Q99758 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ABCA3Q99758 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.46■□□□□ 0.87
ABCA3Q99758 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ABCA3Q99758 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ABCA3Q99758 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.46■□□□□ 0.87
ABCA3Q99758 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ABCA3Q99758 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms