Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC10.56□□□□□ -0.72
LITAFQ99732 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.56□□□□□ -0.72
LITAFQ99732 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
LITAFQ99732 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC10.56□□□□□ -0.72
LITAFQ99732 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC10.56□□□□□ -0.72
LITAFQ99732 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC10.56□□□□□ -0.72
LITAFQ99732 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
LITAFQ99732 NTF6B-201ENST00000591913 560 ntBASIC10.56□□□□□ -0.72
LITAFQ99732 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
LITAFQ99732 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.56□□□□□ -0.72
LITAFQ99732 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 MST1P2-201ENST00000457982 2291 ntBASIC10.56□□□□□ -0.72
LITAFQ99732 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
LITAFQ99732 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.56□□□□□ -0.72
LITAFQ99732 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC10.56□□□□□ -0.72
LITAFQ99732 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LITAFQ99732 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
LITAFQ99732 AC129492.6-201ENST00000611383 1305 ntBASIC10.56□□□□□ -0.72
LITAFQ99732 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LITAFQ99732 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.56□□□□□ -0.72
LITAFQ99732 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC10.55□□□□□ -0.72
LITAFQ99732 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LITAFQ99732 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LITAFQ99732 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC10.55□□□□□ -0.72
LITAFQ99732 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 NSUN5P1-202ENST00000421140 1535 ntBASIC10.55□□□□□ -0.72
LITAFQ99732 NSUN5P2-203ENST00000457352 1529 ntBASIC10.55□□□□□ -0.72
LITAFQ99732 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LITAFQ99732 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC10.55□□□□□ -0.72
LITAFQ99732 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LITAFQ99732 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 MTRF1LP2-201ENST00000506027 1122 ntBASIC10.55□□□□□ -0.72
LITAFQ99732 AP002469.2-201ENST00000531724 424 ntBASIC10.55□□□□□ -0.72
LITAFQ99732 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LITAFQ99732 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC10.55□□□□□ -0.72
LITAFQ99732 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC10.55□□□□□ -0.72
LITAFQ99732 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LITAFQ99732 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC10.55□□□□□ -0.72
LITAFQ99732 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC10.55□□□□□ -0.72
LITAFQ99732 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC10.55□□□□□ -0.72
LITAFQ99732 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 AL356585.2-201ENST00000625078 2396 ntBASIC10.55□□□□□ -0.72
LITAFQ99732 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LITAFQ99732 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC10.55□□□□□ -0.72
LITAFQ99732 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC10.55□□□□□ -0.72
LITAFQ99732 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LITAFQ99732 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC10.55□□□□□ -0.72
LITAFQ99732 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LITAFQ99732 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC10.54□□□□□ -0.72
LITAFQ99732 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC10.54□□□□□ -0.72
LITAFQ99732 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.54□□□□□ -0.72
LITAFQ99732 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
LITAFQ99732 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LITAFQ99732 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LITAFQ99732 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms