Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC134915.1-201ENST00000426461 574 ntBASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 BCRP2-202ENST00000447763 634 ntBASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 BCRP6-201ENST00000510112 632 ntBASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 BCRP7-201ENST00000511549 544 ntBASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 AC015936.2-201ENST00000593177 259 ntBASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 AL121723.1-201ENST00000445194 1519 ntBASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC85AQ96PX6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 AL162726.2-201ENST00000438986 1017 ntBASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 AC124283.3-201ENST00000570869 594 ntBASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85AQ96PX6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC85AQ96PX6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC85AQ96PX6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC85AQ96PX6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.58■□□□□ 0.73
CCDC85AQ96PX6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC85AQ96PX6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC85AQ96PX6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC85AQ96PX6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC85AQ96PX6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC85AQ96PX6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC85AQ96PX6 MIR648-201ENST00000385046 94 ntBASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 BNIP3P42-201ENST00000454982 569 ntBASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 BNIP3P29-201ENST00000598302 571 ntBASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 AC011447.5-201ENST00000616168 564 ntBASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 COX11-210ENST00000639671 696 ntBASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85AQ96PX6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 C1QBPP1-201ENST00000400117 770 ntBASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms