Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.06■□□□□ 0
COL21A1Q96P44 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
COL21A1Q96P44 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
COL21A1Q96P44 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.06■□□□□ 0
COL21A1Q96P44 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
COL21A1Q96P44 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.06■□□□□ 0
COL21A1Q96P44 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.05■□□□□ 0
COL21A1Q96P44 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
COL21A1Q96P44 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.05■□□□□ 0
COL21A1Q96P44 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.05■□□□□ 0
COL21A1Q96P44 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.05■□□□□ 0
COL21A1Q96P44 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
COL21A1Q96P44 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
COL21A1Q96P44 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
COL21A1Q96P44 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COL21A1Q96P44 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.05■□□□□ 0
COL21A1Q96P44 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 AC245100.5-201ENST00000452108 331 ntBASIC15.05■□□□□ -0
COL21A1Q96P44 AC023141.5-201ENST00000458585 616 ntBASIC15.05■□□□□ -0
COL21A1Q96P44 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.05■□□□□ -0
COL21A1Q96P44 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.05■□□□□ -0
COL21A1Q96P44 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.05■□□□□ -0
COL21A1Q96P44 AC093520.2-201ENST00000561830 333 ntBASIC15.05■□□□□ -0
COL21A1Q96P44 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
COL21A1Q96P44 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.05■□□□□ -0
COL21A1Q96P44 AP001160.2-201ENST00000596071 487 ntBASIC15.05■□□□□ -0
COL21A1Q96P44 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.05■□□□□ -0
COL21A1Q96P44 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.05■□□□□ -0
COL21A1Q96P44 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.05■□□□□ -0
COL21A1Q96P44 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
COL21A1Q96P44 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.05■□□□□ -0
COL21A1Q96P44 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.05■□□□□ -0
COL21A1Q96P44 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.05■□□□□ -0
COL21A1Q96P44 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COL21A1Q96P44 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
COL21A1Q96P44 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.04■□□□□ -0
COL21A1Q96P44 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
COL21A1Q96P44 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
COL21A1Q96P44 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.04■□□□□ -0
COL21A1Q96P44 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.04■□□□□ -0
COL21A1Q96P44 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.04■□□□□ -0
COL21A1Q96P44 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.04■□□□□ -0
COL21A1Q96P44 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.04■□□□□ -0
COL21A1Q96P44 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.04■□□□□ -0
COL21A1Q96P44 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 FOXO1B-201ENST00000504678 1527 ntBASIC15.04■□□□□ -0
COL21A1Q96P44 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.04■□□□□ -0
COL21A1Q96P44 FAM58DP-201ENST00000428076 619 ntBASIC15.04■□□□□ -0
COL21A1Q96P44 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.04■□□□□ -0
COL21A1Q96P44 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.04■□□□□ -0
COL21A1Q96P44 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
COL21A1Q96P44 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.04■□□□□ -0
COL21A1Q96P44 AC009093.7-201ENST00000623853 1223 ntBASIC15.04■□□□□ -0
COL21A1Q96P44 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
COL21A1Q96P44 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
COL21A1Q96P44 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.04■□□□□ -0
COL21A1Q96P44 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.04■□□□□ -0
COL21A1Q96P44 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.04■□□□□ -0
COL21A1Q96P44 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.04■□□□□ -0
COL21A1Q96P44 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL21A1Q96P44 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.04■□□□□ -0
COL21A1Q96P44 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.04■□□□□ -0
COL21A1Q96P44 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.03■□□□□ -0
COL21A1Q96P44 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.03■□□□□ -0
COL21A1Q96P44 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms