Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX27Q96L92 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX27Q96L92 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX27Q96L92 AL513523.2-202ENST00000427283 2040 ntBASIC17.03■□□□□ 0.32
SNX27Q96L92 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX27Q96L92 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX27Q96L92 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.03■□□□□ 0.32
SNX27Q96L92 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SNX27Q96L92 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.03■□□□□ 0.32
SNX27Q96L92 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX27Q96L92 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SNX27Q96L92 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 AC104596.2-201ENST00000512793 793 ntBASIC17.03■□□□□ 0.32
SNX27Q96L92 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SNX27Q96L92 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX27Q96L92 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.03■□□□□ 0.32
SNX27Q96L92 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX27Q96L92 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX27Q96L92 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 AC010491.1-201ENST00000563101 2797 ntBASIC17.03■□□□□ 0.32
SNX27Q96L92 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
SNX27Q96L92 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX27Q96L92 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX27Q96L92 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX27Q96L92 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX27Q96L92 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX27Q96L92 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX27Q96L92 AL121723.1-201ENST00000445194 1519 ntBASIC17.02■□□□□ 0.32
SNX27Q96L92 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SNX27Q96L92 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX27Q96L92 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX27Q96L92 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX27Q96L92 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX27Q96L92 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SNX27Q96L92 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SNX27Q96L92 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX27Q96L92 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX27Q96L92 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SNX27Q96L92 INE1-201ENST00000456273 945 ntBASIC17.02■□□□□ 0.32
SNX27Q96L92 RN7SL752P-201ENST00000463779 287 ntBASIC17.02■□□□□ 0.32
SNX27Q96L92 KRT18P43-201ENST00000469825 1281 ntBASIC17.02■□□□□ 0.32
SNX27Q96L92 FAM86LP-201ENST00000478302 853 ntBASIC17.02■□□□□ 0.32
SNX27Q96L92 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.02■□□□□ 0.32
SNX27Q96L92 KRT17P8-201ENST00000540749 863 ntBASIC17.02■□□□□ 0.32
SNX27Q96L92 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX27Q96L92 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.02■□□□□ 0.32
SNX27Q96L92 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SNX27Q96L92 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX27Q96L92 WFDC1-204ENST00000613603 549 ntBASIC17.02■□□□□ 0.32
SNX27Q96L92 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX27Q96L92 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX27Q96L92 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX27Q96L92 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SNX27Q96L92 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SNX27Q96L92 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX27Q96L92 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX27Q96L92 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.02■□□□□ 0.31
SNX27Q96L92 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.02■□□□□ 0.31
SNX27Q96L92 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX27Q96L92 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
SNX27Q96L92 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNX27Q96L92 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX27Q96L92 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.01■□□□□ 0.31
SNX27Q96L92 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SNX27Q96L92 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SNX27Q96L92 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SNX27Q96L92 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SNX27Q96L92 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SNX27Q96L92 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
SNX27Q96L92 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.01■□□□□ 0.31
SNX27Q96L92 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.01■□□□□ 0.31
SNX27Q96L92 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SNX27Q96L92 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms