Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 AP000842.3-202ENST00000569238 1080 ntBASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ATG4AQ8WYN0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATG4AQ8WYN0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
ATG4AQ8WYN0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
ATG4AQ8WYN0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ATG4AQ8WYN0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.46■□□□□ 0.22
ATG4AQ8WYN0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.46■□□□□ 0.22
ATG4AQ8WYN0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ATG4AQ8WYN0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 MIR940-201ENST00000401276 94 ntBASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 RN7SL589P-201ENST00000481268 310 ntBASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 AC079140.1-201ENST00000508039 487 ntBASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 LINC01225-203ENST00000563550 1244 ntBASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.45■□□□□ 0.22
ATG4AQ8WYN0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms