Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AL355864.2-201ENST00000447420 863 ntBASIC19.36■□□□□ 0.69
RTL9Q8NET4 BCRP2-202ENST00000447763 634 ntBASIC19.36■□□□□ 0.69
RTL9Q8NET4 FO681548.1-201ENST00000455617 1132 ntBASIC19.36■□□□□ 0.69
RTL9Q8NET4 AC106760.1-201ENST00000508690 800 ntBASIC19.36■□□□□ 0.69
RTL9Q8NET4 BCRP6-201ENST00000510112 632 ntBASIC19.36■□□□□ 0.69
RTL9Q8NET4 BCRP7-201ENST00000511549 544 ntBASIC19.36■□□□□ 0.69
RTL9Q8NET4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL9Q8NET4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RTL9Q8NET4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.36■□□□□ 0.69
RTL9Q8NET4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL9Q8NET4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.36■□□□□ 0.69
RTL9Q8NET4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RTL9Q8NET4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL9Q8NET4 PCDHA14-201ENST00000506751 2298 ntBASIC19.36■□□□□ 0.69
RTL9Q8NET4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RTL9Q8NET4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RTL9Q8NET4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL9Q8NET4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RTL9Q8NET4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.36■□□□□ 0.69
RTL9Q8NET4 KRT8P44-201ENST00000441609 1350 ntBASIC19.35■□□□□ 0.69
RTL9Q8NET4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL9Q8NET4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL9Q8NET4 TUBB1P2-201ENST00000422712 1306 ntBASIC19.34■□□□□ 0.69
RTL9Q8NET4 TUBB1P1-201ENST00000503144 1300 ntBASIC19.34■□□□□ 0.69
RTL9Q8NET4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL9Q8NET4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.34■□□□□ 0.69
RTL9Q8NET4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL9Q8NET4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RTL9Q8NET4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RTL9Q8NET4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.34■□□□□ 0.69
RTL9Q8NET4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.34■□□□□ 0.69
RTL9Q8NET4 AL355994.2-201ENST00000447882 704 ntBASIC19.34■□□□□ 0.69
RTL9Q8NET4 CSF2RBP1-201ENST00000447905 391 ntBASIC19.34■□□□□ 0.69
RTL9Q8NET4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL9Q8NET4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL9Q8NET4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.34■□□□□ 0.69
RTL9Q8NET4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL9Q8NET4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL9Q8NET4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL9Q8NET4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL9Q8NET4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL9Q8NET4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL9Q8NET4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL9Q8NET4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RTL9Q8NET4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL9Q8NET4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL9Q8NET4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL9Q8NET4 AC134312.5-201ENST00000568031 1313 ntBASIC19.34■□□□□ 0.69
RTL9Q8NET4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL9Q8NET4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL9Q8NET4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RTL9Q8NET4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL9Q8NET4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.33■□□□□ 0.69
RTL9Q8NET4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTL9Q8NET4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.33■□□□□ 0.69
RTL9Q8NET4 KRT90P-201ENST00000549264 1064 ntBASIC19.33■□□□□ 0.69
RTL9Q8NET4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTL9Q8NET4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTL9Q8NET4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL9Q8NET4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL9Q8NET4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RTL9Q8NET4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTL9Q8NET4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RTL9Q8NET4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.33■□□□□ 0.68
RTL9Q8NET4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.33■□□□□ 0.68
RTL9Q8NET4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL9Q8NET4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL9Q8NET4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.33■□□□□ 0.68
RTL9Q8NET4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL9Q8NET4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTL9Q8NET4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTL9Q8NET4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.33■□□□□ 0.68
RTL9Q8NET4 AC092364.2-201ENST00000596710 2692 ntBASIC19.33■□□□□ 0.68
RTL9Q8NET4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms