Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRFBP1Q8NEF9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SRFBP1Q8NEF9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRFBP1Q8NEF9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.18■□□□□ 0.02
SRFBP1Q8NEF9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SRFBP1Q8NEF9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SRFBP1Q8NEF9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRFBP1Q8NEF9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRFBP1Q8NEF9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRFBP1Q8NEF9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 AC107890.1-201ENST00000422478 521 ntBASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRFBP1Q8NEF9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 FO538757.1-201ENST00000623083 1397 ntBASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 METTL21AP1-201ENST00000438852 635 ntBASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 AC051619.7-201ENST00000568314 623 ntBASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 AC023824.1-201ENST00000562945 2975 ntBASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SRFBP1Q8NEF9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms