Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 HILS1-202ENST00000545329 423 ntBASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 AC044860.1-202ENST00000559481 777 ntBASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 AL033527.5-202ENST00000641632 1098 ntBASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 SLC7A15P-201ENST00000424028 1363 ntBASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC155Q8N6L0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 LINC01144-201ENST00000626198 1710 ntBASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 AL603832.2-201ENST00000566195 2125 ntBASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 AL162274.1-201ENST00000617191 1098 ntBASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 AL513477.1-201ENST00000602865 2407 ntBASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC155Q8N6L0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC155Q8N6L0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms