Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 KRT18P13-201ENST00000400056 1290 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 SPDYE7P-202ENST00000420373 878 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 SPDYE14P-201ENST00000442619 822 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 SNHG9-202ENST00000564014 471 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 AC105021.1-202ENST00000570572 669 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 AL450472.2-201ENST00000603663 1156 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 AC003101.2-201ENST00000612557 442 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 AC007967.4-201ENST00000614700 386 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 AP001059.3-201ENST00000619053 235 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 AC134684.3-201ENST00000641758 218 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 PRAL-201ENST00000624952 3286 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 AC004967.1-201ENST00000453589 447 ntBASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 PHKG1P2-201ENST00000457537 863 ntBASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 AL512356.2-201ENST00000546955 174 ntBASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 AC079781.4-201ENST00000641908 219 ntBASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.57□□□□□ -0.4
TTC9CQ8N5M4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms