Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 AC010491.1-201ENST00000563101 2797 ntBASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PHTF2Q8N3S3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 AL596087.1-201ENST00000400979 1969 ntBASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 ARSEP1-201ENST00000420443 635 ntBASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 MEP1AP4-201ENST00000423244 1087 ntBASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 ELK1P1-201ENST00000485699 580 ntBASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 AC132938.2-201ENST00000579188 680 ntBASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 AL591163.1-201ENST00000641757 987 ntBASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.4■□□□□ 0.22
PHTF2Q8N3S3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
PHTF2Q8N3S3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.39■□□□□ 0.22
PHTF2Q8N3S3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PHTF2Q8N3S3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
PHTF2Q8N3S3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PHTF2Q8N3S3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 AL691432.1-201ENST00000596308 1422 ntBASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 AL512384.1-201ENST00000406683 331 ntBASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 RN7SL752P-201ENST00000463779 287 ntBASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 CTBP2P3-201ENST00000585629 1255 ntBASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 AL008721.1-201ENST00000609964 604 ntBASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 AL603832.2-201ENST00000566195 2125 ntBASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PHTF2Q8N3S3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHTF2Q8N3S3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHTF2Q8N3S3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHTF2Q8N3S3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PHTF2Q8N3S3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms