Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.71■□□□□ 0.27
NUP93Q8N1F7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.71■□□□□ 0.27
NUP93Q8N1F7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP93Q8N1F7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NUP93Q8N1F7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 SLC7A15P-201ENST00000424028 1363 ntBASIC16.7■□□□□ 0.26
NUP93Q8N1F7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 AC023310.3-201ENST00000557027 670 ntBASIC16.7■□□□□ 0.26
NUP93Q8N1F7 AC100756.1-201ENST00000562736 682 ntBASIC16.7■□□□□ 0.26
NUP93Q8N1F7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 AC138749.3-201ENST00000567691 622 ntBASIC16.7■□□□□ 0.26
NUP93Q8N1F7 TP53TG3HP-202ENST00000569755 579 ntBASIC16.7■□□□□ 0.26
NUP93Q8N1F7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 LINC01115-203ENST00000606068 577 ntBASIC16.7■□□□□ 0.26
NUP93Q8N1F7 AC116165.1-201ENST00000611806 668 ntBASIC16.7■□□□□ 0.26
NUP93Q8N1F7 AC025048.6-201ENST00000634326 1161 ntBASIC16.7■□□□□ 0.26
NUP93Q8N1F7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 CYP2T1P-202ENST00000641596 2535 ntBASIC16.7■□□□□ 0.26
NUP93Q8N1F7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP93Q8N1F7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 AC074338.1-201ENST00000416825 156 ntBASIC16.69■□□□□ 0.26
NUP93Q8N1F7 AC136604.1-201ENST00000418535 575 ntBASIC16.69■□□□□ 0.26
NUP93Q8N1F7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 AC055876.2-201ENST00000531834 546 ntBASIC16.69■□□□□ 0.26
NUP93Q8N1F7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 FLJ16779-201ENST00000612722 7638 ntBASIC16.69■□□□□ 0.26
NUP93Q8N1F7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
NUP93Q8N1F7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms