Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS52Q8N1B4 LINC00554-201ENST00000564841 3011 ntBASIC17.23■□□□□ 0.35
VPS52Q8N1B4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 AC112492.5-201ENST00000421897 457 ntBASIC17.23■□□□□ 0.35
VPS52Q8N1B4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 AC005622.1-201ENST00000636801 1703 ntBASIC17.23■□□□□ 0.35
VPS52Q8N1B4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS52Q8N1B4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 RAB43P1-201ENST00000561790 589 ntBASIC17.22■□□□□ 0.35
VPS52Q8N1B4 AC106886.1-201ENST00000568660 600 ntBASIC17.22■□□□□ 0.35
VPS52Q8N1B4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 AC093726.1-201ENST00000608064 963 ntBASIC17.22■□□□□ 0.35
VPS52Q8N1B4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 CYP2T1P-202ENST00000641596 2535 ntBASIC17.22■□□□□ 0.35
VPS52Q8N1B4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS52Q8N1B4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VPS52Q8N1B4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS52Q8N1B4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms