Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 MIR4313-201ENST00000580760 101 ntBASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC116Q8IYX3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 TSEN15P1-201ENST00000423257 515 ntBASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 AC069262.1-201ENST00000539058 672 ntBASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 AL512356.2-201ENST00000546955 174 ntBASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 AC004449.1-201ENST00000564240 433 ntBASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 AL133215.2-201ENST00000609242 977 ntBASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 AL035456.1-201ENST00000456064 1369 ntBASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC116Q8IYX3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms