Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 CICP4-201ENST00000447359 2812 ntBASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HDDC2Q7Z4H3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 AL355306.1-201ENST00000415580 579 ntBASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 AC091812.2-201ENST00000619081 385 ntBASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HDDC2Q7Z4H3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 AL589702.1-201ENST00000641229 1509 ntBASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 AL731571.1-201ENST00000617058 5428 ntBASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
HDDC2Q7Z4H3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 AL022342.1-201ENST00000400363 863 ntBASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 MCCD1P2-201ENST00000423228 335 ntBASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 FAM58CP-201ENST00000435741 640 ntBASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 AC098859.1-201ENST00000502915 1238 ntBASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 MIR4321-201ENST00000592276 80 ntBASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 AC073389.1-201ENST00000595595 795 ntBASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 AC099522.2-201ENST00000607001 744 ntBASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 AC092865.6-201ENST00000642101 219 ntBASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HDDC2Q7Z4H3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDDC2Q7Z4H3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDDC2Q7Z4H3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HDDC2Q7Z4H3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HDDC2Q7Z4H3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDDC2Q7Z4H3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HDDC2Q7Z4H3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms