Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 SPDYE17-201ENST00000412399 783 ntBASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 DNAJB3-202ENST00000449667 1266 ntBASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 AC105021.1-202ENST00000570572 669 ntBASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NHLRC1Q6VVB1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 MIR4313-201ENST00000580760 101 ntBASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 REXO1L1P-202ENST00000608646 1974 ntBASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 AC007967.4-201ENST00000614700 386 ntBASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.28□□□□□ -0.12
NHLRC1Q6VVB1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms