Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 UPF3AP3-201ENST00000420996 769 ntBASIC17.85■□□□□ 0.45
SHC4Q6S5L8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.85■□□□□ 0.45
SHC4Q6S5L8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 AC004835.2-201ENST00000603762 682 ntBASIC17.85■□□□□ 0.45
SHC4Q6S5L8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHC4Q6S5L8 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 AGAP7P-201ENST00000582299 2062 ntBASIC17.84■□□□□ 0.45
SHC4Q6S5L8 AGAP14-201ENST00000624701 2060 ntBASIC17.84■□□□□ 0.45
SHC4Q6S5L8 AC023024.2-201ENST00000623561 1993 ntBASIC17.84■□□□□ 0.45
SHC4Q6S5L8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 BX842568.4-201ENST00000421222 227 ntBASIC17.84■□□□□ 0.45
SHC4Q6S5L8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.84■□□□□ 0.45
SHC4Q6S5L8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.83■□□□□ 0.45
SHC4Q6S5L8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 FO393414.2-201ENST00000405153 598 ntBASIC17.83■□□□□ 0.44
SHC4Q6S5L8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 MIR4453-201ENST00000584019 89 ntBASIC17.83■□□□□ 0.44
SHC4Q6S5L8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms