Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 AC009090.5-201ENST00000624886 2285 ntBASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
FOXR1Q6PIV2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.64■□□□□ 0.26
FOXR1Q6PIV2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
FOXR1Q6PIV2 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 PTCHD3P3-201ENST00000403073 906 ntBASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 FAM58CP-201ENST00000435741 640 ntBASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 DUX4L17-201ENST00000557360 1267 ntBASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 AL031432.2-201ENST00000566714 459 ntBASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 AL928711.1-201ENST00000570165 459 ntBASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 MIR3197-201ENST00000582241 73 ntBASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 LINC01230-201ENST00000625222 3017 ntBASIC16.64■□□□□ 0.25
FOXR1Q6PIV2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 IGLL3P-201ENST00000412472 434 ntBASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 AC004449.1-201ENST00000564240 433 ntBASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 AC019129.2-201ENST00000609837 1235 ntBASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
FOXR1Q6PIV2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 COL6A4P2-202ENST00000504443 2753 ntBASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms