Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTR9Q6PD62 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTR9Q6PD62 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTR9Q6PD62 TOMM22P5-201ENST00000416399 439 ntBASIC18.79■□□□□ 0.6
CTR9Q6PD62 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 AC007431.3-201ENST00000623221 587 ntBASIC18.79■□□□□ 0.6
CTR9Q6PD62 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTR9Q6PD62 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
CTR9Q6PD62 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTR9Q6PD62 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTR9Q6PD62 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTR9Q6PD62 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTR9Q6PD62 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 SLED1-202ENST00000512051 380 ntBASIC18.78■□□□□ 0.6
CTR9Q6PD62 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.78■□□□□ 0.6
CTR9Q6PD62 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTR9Q6PD62 CLK3P2-201ENST00000427566 1453 ntBASIC18.77■□□□□ 0.6
CTR9Q6PD62 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 PCDHA1-201ENST00000378133 2726 ntBASIC18.77■□□□□ 0.6
CTR9Q6PD62 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 NME2P1-201ENST00000426182 414 ntBASIC18.77■□□□□ 0.6
CTR9Q6PD62 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 MYCLP2-201ENST00000449268 967 ntBASIC18.77■□□□□ 0.6
CTR9Q6PD62 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 AC123567.1-201ENST00000548294 1261 ntBASIC18.77■□□□□ 0.6
CTR9Q6PD62 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CTR9Q6PD62 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTR9Q6PD62 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms