Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 AC254562.1-201ENST00000417586 456 ntBASIC14.49□□□□□ -0.09
NIPAL3Q6P499 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 KRT18P32-201ENST00000424695 1287 ntBASIC14.49□□□□□ -0.09
NIPAL3Q6P499 AC142381.1-201ENST00000426099 345 ntBASIC14.49□□□□□ -0.09
NIPAL3Q6P499 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 AC098859.1-201ENST00000502915 1238 ntBASIC14.49□□□□□ -0.09
NIPAL3Q6P499 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 SLC25A39P2-201ENST00000537614 270 ntBASIC14.49□□□□□ -0.09
NIPAL3Q6P499 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.49□□□□□ -0.09
NIPAL3Q6P499 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NIPAL3Q6P499 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 CNN2P11-201ENST00000429351 262 ntBASIC14.48□□□□□ -0.09
NIPAL3Q6P499 AP006288.1-201ENST00000446065 395 ntBASIC14.48□□□□□ -0.09
NIPAL3Q6P499 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 AC079781.4-201ENST00000641908 219 ntBASIC14.48□□□□□ -0.09
NIPAL3Q6P499 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.48□□□□□ -0.09
NIPAL3Q6P499 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms