Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 IGHV3-71-201ENST00000523324 359 ntBASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 RN7SL828P-201ENST00000607615 303 ntBASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HERC4Q5GLZ8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 KRT8P37-201ENST00000451609 1420 ntBASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 MTND6P24-201ENST00000440466 518 ntBASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 AC004890.2-204ENST00000481968 304 ntBASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 HYMAI-201ENST00000635591 3347 ntBASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 AC046158.3-201ENST00000624947 2558 ntBASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HERC4Q5GLZ8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 AL035456.1-201ENST00000456064 1369 ntBASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 AL133215.2-201ENST00000609242 977 ntBASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms