Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.22□□□□□ -0.61
CKS1BP61024 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS1BP61024 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 AL845331.1-201ENST00000424978 1190 ntBASIC11.22□□□□□ -0.61
CKS1BP61024 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 KRT18P1-202ENST00000452408 1331 ntBASIC11.22□□□□□ -0.61
CKS1BP61024 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS1BP61024 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
CKS1BP61024 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS1BP61024 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS1BP61024 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS1BP61024 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
CKS1BP61024 LINC01023-201ENST00000606054 436 ntBASIC11.22□□□□□ -0.61
CKS1BP61024 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.22□□□□□ -0.61
CKS1BP61024 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.22□□□□□ -0.61
CKS1BP61024 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 AL139011.1-202ENST00000642063 584 ntBASIC11.22□□□□□ -0.61
CKS1BP61024 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.22□□□□□ -0.61
CKS1BP61024 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CKS1BP61024 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CKS1BP61024 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.21□□□□□ -0.61
CKS1BP61024 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.21□□□□□ -0.61
CKS1BP61024 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
CKS1BP61024 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 AC002310.6-201ENST00000624451 1377 ntBASIC11.21□□□□□ -0.61
CKS1BP61024 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
CKS1BP61024 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.21□□□□□ -0.61
CKS1BP61024 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
CKS1BP61024 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.21□□□□□ -0.61
CKS1BP61024 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS1BP61024 AL136038.3-201ENST00000561909 1096 ntBASIC11.21□□□□□ -0.61
CKS1BP61024 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.21□□□□□ -0.61
CKS1BP61024 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS1BP61024 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms