Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH13P55290 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH13P55290 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH13P55290 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH13P55290 ADH5P3-201ENST00000433842 1137 ntBASIC15.56■□□□□ 0.08
CDH13P55290 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH13P55290 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 KRT8P48-201ENST00000515599 1220 ntBASIC15.56■□□□□ 0.08
CDH13P55290 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH13P55290 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.56■□□□□ 0.08
CDH13P55290 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.56■□□□□ 0.08
CDH13P55290 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.56■□□□□ 0.08
CDH13P55290 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH13P55290 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDH13P55290 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDH13P55290 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH13P55290 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDH13P55290 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH13P55290 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH13P55290 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 AL161772.1-201ENST00000610494 4412 ntBASIC15.55■□□□□ 0.08
CDH13P55290 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH13P55290 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH13P55290 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH13P55290 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH13P55290 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH13P55290 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDH13P55290 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH13P55290 SPCS2P4-201ENST00000436160 681 ntBASIC15.55■□□□□ 0.08
CDH13P55290 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH13P55290 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH13P55290 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH13P55290 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH13P55290 FAM86C2P-203ENST00000528684 1004 ntBASIC15.55■□□□□ 0.08
CDH13P55290 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH13P55290 AP000842.3-202ENST00000569238 1080 ntBASIC15.55■□□□□ 0.08
CDH13P55290 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH13P55290 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH13P55290 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH13P55290 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH13P55290 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CDH13P55290 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH13P55290 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH13P55290 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH13P55290 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH13P55290 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH13P55290 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH13P55290 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH13P55290 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH13P55290 MIR346-201ENST00000362234 95 ntBASIC15.54■□□□□ 0.08
CDH13P55290 FAM220BP-201ENST00000377689 816 ntBASIC15.54■□□□□ 0.08
CDH13P55290 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH13P55290 AC004987.2-201ENST00000395959 1148 ntBASIC15.54■□□□□ 0.08
CDH13P55290 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.54■□□□□ 0.08
CDH13P55290 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH13P55290 SPDYE11-202ENST00000450699 704 ntBASIC15.54■□□□□ 0.08
CDH13P55290 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH13P55290 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH13P55290 LINC01225-203ENST00000563550 1244 ntBASIC15.54■□□□□ 0.08
CDH13P55290 SPDYE9P-201ENST00000570642 692 ntBASIC15.54■□□□□ 0.08
CDH13P55290 SPDYE10P-202ENST00000612005 668 ntBASIC15.54■□□□□ 0.08
CDH13P55290 SPDYE8P-202ENST00000612377 668 ntBASIC15.54■□□□□ 0.08
CDH13P55290 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms