Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC138932.2-201ENST00000548268 1459 ntBASIC11.62□□□□□ -0.55
APOC4P55056 AC126755.4-201ENST00000549796 1459 ntBASIC11.62□□□□□ -0.55
APOC4P55056 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.62□□□□□ -0.55
APOC4P55056 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.61□□□□□ -0.55
APOC4P55056 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.61□□□□□ -0.55
APOC4P55056 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
APOC4P55056 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
APOC4P55056 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 PCDHA14-201ENST00000506751 2298 ntBASIC11.61□□□□□ -0.55
APOC4P55056 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.61□□□□□ -0.55
APOC4P55056 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.61□□□□□ -0.55
APOC4P55056 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
APOC4P55056 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC11.61□□□□□ -0.55
APOC4P55056 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.61□□□□□ -0.55
APOC4P55056 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.61□□□□□ -0.55
APOC4P55056 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.61□□□□□ -0.55
APOC4P55056 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.61□□□□□ -0.55
APOC4P55056 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.61□□□□□ -0.55
APOC4P55056 MYCLP2-201ENST00000449268 967 ntBASIC11.61□□□□□ -0.55
APOC4P55056 GAPDHP21-201ENST00000450301 1010 ntBASIC11.61□□□□□ -0.55
APOC4P55056 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.61□□□□□ -0.55
APOC4P55056 RN7SL752P-201ENST00000463779 287 ntBASIC11.61□□□□□ -0.55
APOC4P55056 SPDYE18-201ENST00000510091 1050 ntBASIC11.61□□□□□ -0.55
APOC4P55056 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.61□□□□□ -0.55
APOC4P55056 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.61□□□□□ -0.55
APOC4P55056 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
APOC4P55056 AC123567.1-201ENST00000548294 1261 ntBASIC11.61□□□□□ -0.55
APOC4P55056 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
APOC4P55056 AC023310.3-201ENST00000557027 670 ntBASIC11.61□□□□□ -0.55
APOC4P55056 AC100756.1-201ENST00000562736 682 ntBASIC11.61□□□□□ -0.55
APOC4P55056 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.61□□□□□ -0.55
APOC4P55056 AC138749.3-201ENST00000567691 622 ntBASIC11.61□□□□□ -0.55
APOC4P55056 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.61□□□□□ -0.55
APOC4P55056 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.61□□□□□ -0.55
APOC4P55056 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.61□□□□□ -0.55
APOC4P55056 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.61□□□□□ -0.55
APOC4P55056 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.61□□□□□ -0.55
APOC4P55056 AC008494.3-201ENST00000606615 944 ntBASIC11.61□□□□□ -0.55
APOC4P55056 AC116165.1-201ENST00000611806 668 ntBASIC11.61□□□□□ -0.55
APOC4P55056 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
APOC4P55056 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.61□□□□□ -0.55
APOC4P55056 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
APOC4P55056 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.61□□□□□ -0.55
APOC4P55056 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
APOC4P55056 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.61□□□□□ -0.55
APOC4P55056 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC11.61□□□□□ -0.55
APOC4P55056 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOC4P55056 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.61□□□□□ -0.55
APOC4P55056 LTB4R2-202ENST00000528054 3092 ntBASIC11.61□□□□□ -0.55
APOC4P55056 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
APOC4P55056 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
APOC4P55056 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
APOC4P55056 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC4P55056 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms