Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.29■□□□□ 0.2
ATXN3P54252 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATXN3P54252 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATXN3P54252 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATXN3P54252 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ATXN3P54252 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATXN3P54252 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.28■□□□□ 0.2
ATXN3P54252 AL391825.1-201ENST00000457671 1364 ntBASIC16.28■□□□□ 0.2
ATXN3P54252 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATXN3P54252 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ATXN3P54252 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ATXN3P54252 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.28■□□□□ 0.2
ATXN3P54252 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.28■□□□□ 0.2
ATXN3P54252 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ATXN3P54252 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 INE1-201ENST00000456273 945 ntBASIC16.28■□□□□ 0.2
ATXN3P54252 API5-211ENST00000534695 560 ntTSL 5 BASIC16.28■□□□□ 0.2
ATXN3P54252 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.28■□□□□ 0.2
ATXN3P54252 RN7SL828P-201ENST00000607615 303 ntBASIC16.28■□□□□ 0.2
ATXN3P54252 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.28■□□□□ 0.2
ATXN3P54252 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.28■□□□□ 0.2
ATXN3P54252 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.28■□□□□ 0.2
ATXN3P54252 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.28■□□□□ 0.2
ATXN3P54252 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
ATXN3P54252 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATXN3P54252 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.28■□□□□ 0.2
ATXN3P54252 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.27■□□□□ 0.2
ATXN3P54252 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.27■□□□□ 0.2
ATXN3P54252 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ATXN3P54252 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.27■□□□□ 0.2
ATXN3P54252 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ATXN3P54252 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.27■□□□□ 0.2
ATXN3P54252 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 AL512384.1-201ENST00000406683 331 ntBASIC16.27■□□□□ 0.2
ATXN3P54252 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.27■□□□□ 0.2
ATXN3P54252 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ATXN3P54252 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.27■□□□□ 0.2
ATXN3P54252 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ATXN3P54252 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ATXN3P54252 AC009407.1-201ENST00000568958 598 ntBASIC16.27■□□□□ 0.2
ATXN3P54252 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.27■□□□□ 0.2
ATXN3P54252 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.27■□□□□ 0.2
ATXN3P54252 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.27■□□□□ 0.2
ATXN3P54252 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATXN3P54252 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.27■□□□□ 0.2
ATXN3P54252 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATXN3P54252 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATXN3P54252 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATXN3P54252 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATXN3P54252 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ATXN3P54252 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATXN3P54252 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms