Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAB5CP51148 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RAB5CP51148 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
RAB5CP51148 AC245100.5-201ENST00000452108 331 ntBASIC12.82□□□□□ -0.36
RAB5CP51148 FAM201B-201ENST00000458407 597 ntBASIC12.82□□□□□ -0.36
RAB5CP51148 AL359075.1-203ENST00000462729 1002 ntBASIC12.82□□□□□ -0.36
RAB5CP51148 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB5CP51148 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
RAB5CP51148 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB5CP51148 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB5CP51148 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB5CP51148 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB5CP51148 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB5CP51148 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAB5CP51148 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB5CP51148 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB5CP51148 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAB5CP51148 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB5CP51148 PMPCAP1-201ENST00000508114 1576 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 AC027612.1-201ENST00000445234 2395 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
RAB5CP51148 AC148477.5-201ENST00000625164 1645 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 WASH6P-202ENST00000359512 1437 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB5CP51148 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
RAB5CP51148 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 STARP1-201ENST00000397973 869 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.81□□□□□ -0.36
RAB5CP51148 AC011840.4-201ENST00000578471 627 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB5CP51148 AC011467.2-201ENST00000598425 242 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 Z99916.2-201ENST00000604037 246 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 MBLAC2-202ENST00000514906 1936 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 BX640514.1-201ENST00000583223 1918 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB5CP51148 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB5CP51148 AC027601.5-201ENST00000624065 2482 ntBASIC12.81□□□□□ -0.36
RAB5CP51148 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAB5CP51148 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB5CP51148 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RAB5CP51148 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB5CP51148 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB5CP51148 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB5CP51148 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms