Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.1□□□□□ -0.15
LHX2P50458 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.1□□□□□ -0.15
LHX2P50458 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX2P50458 AC000095.1-201ENST00000603208 874 ntBASIC14.1□□□□□ -0.15
LHX2P50458 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX2P50458 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LHX2P50458 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX2P50458 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LHX2P50458 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LHX2P50458 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX2P50458 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LHX2P50458 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.09□□□□□ -0.15
LHX2P50458 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.09□□□□□ -0.15
LHX2P50458 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LHX2P50458 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LHX2P50458 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX2P50458 AL442647.2-201ENST00000429864 857 ntBASIC14.09□□□□□ -0.15
LHX2P50458 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.09□□□□□ -0.15
LHX2P50458 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LHX2P50458 AC011495.1-201ENST00000498085 584 ntBASIC14.09□□□□□ -0.15
LHX2P50458 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
LHX2P50458 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.09□□□□□ -0.15
LHX2P50458 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX2P50458 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LHX2P50458 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LHX2P50458 WFDC1-204ENST00000613603 549 ntBASIC14.09□□□□□ -0.15
LHX2P50458 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.09□□□□□ -0.15
LHX2P50458 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LHX2P50458 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.09□□□□□ -0.15
LHX2P50458 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.09□□□□□ -0.15
LHX2P50458 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX2P50458 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX2P50458 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LHX2P50458 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX2P50458 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX2P50458 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LHX2P50458 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LHX2P50458 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
LHX2P50458 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LHX2P50458 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LHX2P50458 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LHX2P50458 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LHX2P50458 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX2P50458 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.08□□□□□ -0.16
LHX2P50458 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LHX2P50458 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LHX2P50458 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX2P50458 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX2P50458 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
LHX2P50458 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX2P50458 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LHX2P50458 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LHX2P50458 AL133267.1-201ENST00000398220 340 ntBASIC14.08□□□□□ -0.16
LHX2P50458 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
LHX2P50458 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LHX2P50458 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
LHX2P50458 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.08□□□□□ -0.16
LHX2P50458 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.08□□□□□ -0.16
LHX2P50458 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.08□□□□□ -0.16
LHX2P50458 KRT17P7-201ENST00000451704 1104 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms