Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CPT1AP50416 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.41■□□□□ 0.38
CPT1AP50416 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CPT1AP50416 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CPT1AP50416 AC243960.2-201ENST00000600996 747 ntBASIC17.41■□□□□ 0.38
CPT1AP50416 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CPT1AP50416 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 AL138799.1-201ENST00000448213 1675 ntBASIC17.41■□□□□ 0.38
CPT1AP50416 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.41■□□□□ 0.38
CPT1AP50416 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.41■□□□□ 0.38
CPT1AP50416 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.4■□□□□ 0.38
CPT1AP50416 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CPT1AP50416 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
CPT1AP50416 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.4■□□□□ 0.38
CPT1AP50416 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.4■□□□□ 0.38
CPT1AP50416 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.4■□□□□ 0.38
CPT1AP50416 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.4■□□□□ 0.38
CPT1AP50416 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.4■□□□□ 0.38
CPT1AP50416 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CPT1AP50416 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CPT1AP50416 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.4■□□□□ 0.38
CPT1AP50416 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.4■□□□□ 0.38
CPT1AP50416 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 BCYRN1-201ENST00000418539 200 ntBASIC17.4■□□□□ 0.38
CPT1AP50416 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.4■□□□□ 0.38
CPT1AP50416 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 AC099548.2-209ENST00000480264 625 ntBASIC17.4■□□□□ 0.38
CPT1AP50416 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.4■□□□□ 0.38
CPT1AP50416 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.4■□□□□ 0.38
CPT1AP50416 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.4■□□□□ 0.38
CPT1AP50416 AC091271.1-201ENST00000611877 1162 ntBASIC17.4■□□□□ 0.38
CPT1AP50416 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 BX539320.1-201ENST00000623759 877 ntBASIC17.4■□□□□ 0.38
CPT1AP50416 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.4■□□□□ 0.38
CPT1AP50416 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPT1AP50416 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.39■□□□□ 0.38
CPT1AP50416 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.39■□□□□ 0.38
CPT1AP50416 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.39■□□□□ 0.38
CPT1AP50416 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.39■□□□□ 0.37
CPT1AP50416 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPT1AP50416 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPT1AP50416 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPT1AP50416 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.39■□□□□ 0.37
CPT1AP50416 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 AC006001.1-201ENST00000325130 474 ntBASIC17.39■□□□□ 0.37
CPT1AP50416 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CPT1AP50416 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.39■□□□□ 0.37
CPT1AP50416 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPT1AP50416 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.39■□□□□ 0.37
CPT1AP50416 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPT1AP50416 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.39■□□□□ 0.37
CPT1AP50416 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.39■□□□□ 0.37
CPT1AP50416 AC145423.3-201ENST00000615987 467 ntBASIC17.39■□□□□ 0.37
CPT1AP50416 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.39■□□□□ 0.37
CPT1AP50416 AC138951.2-201ENST00000623455 1161 ntBASIC17.39■□□□□ 0.37
CPT1AP50416 AC132938.4-201ENST00000623835 848 ntBASIC17.39■□□□□ 0.37
CPT1AP50416 KRT8P35-201ENST00000483942 1338 ntBASIC17.39■□□□□ 0.37
CPT1AP50416 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.39■□□□□ 0.37
CPT1AP50416 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPT1AP50416 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms