Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.6■□□□□ 0.57
MRE11P49959 AL161772.1-201ENST00000610494 4412 ntBASIC18.6■□□□□ 0.57
MRE11P49959 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
MRE11P49959 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.6■□□□□ 0.57
MRE11P49959 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 AJ011931.1-201ENST00000618749 2492 ntBASIC18.6■□□□□ 0.57
MRE11P49959 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MRE11P49959 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
MRE11P49959 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
MRE11P49959 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.59■□□□□ 0.57
MRE11P49959 AL592424.1-201ENST00000563624 1536 ntBASIC18.59■□□□□ 0.57
MRE11P49959 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
MRE11P49959 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
MRE11P49959 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.59■□□□□ 0.57
MRE11P49959 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MRE11P49959 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.59■□□□□ 0.57
MRE11P49959 AC023274.1-201ENST00000418278 595 ntBASIC18.59■□□□□ 0.57
MRE11P49959 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.59■□□□□ 0.57
MRE11P49959 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.59■□□□□ 0.57
MRE11P49959 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.59■□□□□ 0.57
MRE11P49959 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.59■□□□□ 0.57
MRE11P49959 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.59■□□□□ 0.57
MRE11P49959 GPR32P1-201ENST00000601788 811 ntBASIC18.59■□□□□ 0.57
MRE11P49959 AL592071.1-201ENST00000611956 408 ntBASIC18.59■□□□□ 0.57
MRE11P49959 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
MRE11P49959 AC124864.1-201ENST00000623408 392 ntBASIC18.59■□□□□ 0.57
MRE11P49959 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC18.59■□□□□ 0.57
MRE11P49959 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 AC006504.5-208ENST00000588784 2401 ntBASIC18.59■□□□□ 0.57
MRE11P49959 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.59■□□□□ 0.57
MRE11P49959 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRE11P49959 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
MRE11P49959 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.58■□□□□ 0.57
MRE11P49959 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MRE11P49959 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRE11P49959 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MRE11P49959 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRE11P49959 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.58■□□□□ 0.57
MRE11P49959 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.58■□□□□ 0.57
MRE11P49959 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MRE11P49959 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRE11P49959 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.58■□□□□ 0.57
MRE11P49959 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRE11P49959 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MRE11P49959 ABR-228ENST00000574437 3196 ntTSL 5 BASIC18.58■□□□□ 0.57
MRE11P49959 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRE11P49959 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
MRE11P49959 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.58■□□□□ 0.56
MRE11P49959 AC254562.1-201ENST00000417586 456 ntBASIC18.58■□□□□ 0.56
MRE11P49959 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.58■□□□□ 0.56
MRE11P49959 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.58■□□□□ 0.56
MRE11P49959 MIR5100-201ENST00000579544 119 ntBASIC18.58■□□□□ 0.56
MRE11P49959 AP005901.3-202ENST00000581653 237 ntBASIC18.58■□□□□ 0.56
MRE11P49959 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.58■□□□□ 0.56
MRE11P49959 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.58■□□□□ 0.56
MRE11P49959 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.58■□□□□ 0.56
MRE11P49959 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.58■□□□□ 0.56
MRE11P49959 AC010327.5-201ENST00000586923 3061 ntBASIC18.58■□□□□ 0.56
MRE11P49959 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MRE11P49959 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
MRE11P49959 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
MRE11P49959 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRE11P49959 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRE11P49959 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRE11P49959 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.58■□□□□ 0.56
MRE11P49959 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.58■□□□□ 0.56
MRE11P49959 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.58■□□□□ 0.56
MRE11P49959 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.58■□□□□ 0.56
MRE11P49959 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.58■□□□□ 0.56
MRE11P49959 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
MRE11P49959 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
MRE11P49959 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms