Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.96■□□□□ 0.31
SSR1P43307 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.96■□□□□ 0.31
SSR1P43307 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SSR1P43307 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 TFAMP1-201ENST00000412727 736 ntBASIC16.96■□□□□ 0.31
SSR1P43307 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.96■□□□□ 0.31
SSR1P43307 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.96■□□□□ 0.31
SSR1P43307 POLD2P1-201ENST00000511220 997 ntBASIC16.96■□□□□ 0.31
SSR1P43307 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.96■□□□□ 0.31
SSR1P43307 AL135744.1-201ENST00000565098 629 ntBASIC16.96■□□□□ 0.31
SSR1P43307 MIR4321-201ENST00000592276 80 ntBASIC16.96■□□□□ 0.31
SSR1P43307 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.96■□□□□ 0.31
SSR1P43307 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 AC008677.1-201ENST00000519230 1561 ntBASIC16.96■□□□□ 0.31
SSR1P43307 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.96■□□□□ 0.31
SSR1P43307 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SSR1P43307 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SSR1P43307 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SSR1P43307 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSR1P43307 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SSR1P43307 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.96■□□□□ 0.3
SSR1P43307 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SSR1P43307 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SSR1P43307 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SSR1P43307 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
SSR1P43307 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.96■□□□□ 0.3
SSR1P43307 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.95■□□□□ 0.3
SSR1P43307 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.95■□□□□ 0.3
SSR1P43307 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.95■□□□□ 0.3
SSR1P43307 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.95■□□□□ 0.3
SSR1P43307 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.95■□□□□ 0.3
SSR1P43307 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.95■□□□□ 0.3
SSR1P43307 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 AC027307.2-201ENST00000591252 911 ntBASIC16.95■□□□□ 0.3
SSR1P43307 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SSR1P43307 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.95■□□□□ 0.3
SSR1P43307 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SSR1P43307 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.95■□□□□ 0.3
SSR1P43307 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
SSR1P43307 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SSR1P43307 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSR1P43307 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SSR1P43307 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.94■□□□□ 0.3
SSR1P43307 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.94■□□□□ 0.3
SSR1P43307 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.94■□□□□ 0.3
SSR1P43307 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
SSR1P43307 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.94■□□□□ 0.3
SSR1P43307 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.94■□□□□ 0.3
SSR1P43307 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSR1P43307 AL022342.1-201ENST00000400363 863 ntBASIC16.94■□□□□ 0.3
SSR1P43307 AL355306.1-201ENST00000415580 579 ntBASIC16.94■□□□□ 0.3
SSR1P43307 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.94■□□□□ 0.3
SSR1P43307 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.94■□□□□ 0.3
SSR1P43307 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.94■□□□□ 0.3
SSR1P43307 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.94■□□□□ 0.3
SSR1P43307 SPTSSB-204ENST00000617024 1292 ntBASIC16.94■□□□□ 0.3
SSR1P43307 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms